Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKWLVKASSLVVLGGMVLSAGSRVLADTYVRPIDNGRITTGFNGYP------GHCGVDYAVPTGTIIRAVADGTVKFAGAGANFSWMTDLAGNCVMIQHADGMH-SGYAHMSRVVARTGEKVKQGDIIGYVGATGMATGPHLHFEFLPANPNFQNGFHGRINPTSLIANVATFSGKTQASAPSIKPLQSAPVQNQSSKLKVYRVDELQKVNGVWLVKNNTLTPTGFDWNDNGIPASEIDEVDANGNLTADQVLQKGGYFIFNPKTLKTVEKPIQGTAGLTWAKTRFANGSSVWLRVDNSQELLYK |
| 4QP5 Chain:B ((12-118)) | ---------------------------------LNNYKKGYGYGPYPLGINGGMHYGVDFFMNIGTPVKAISSGKIVEAG------WSNYGGGNQIGLIENDGVHRQWYMHLSKYNVKVGDYVKAGQIIGWSGSTGYSTAPHLHFQRMVNSFSNSTAQDPMPFLKS-------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QP5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -64591 for 706 contacts (-91.5/contact) +
2D Compatibility (PS) -10506 + (NN) -1919 + (LL) 9244
1D Compatibility (HY) -6000 + (ID) 1950
Total energy: -75722.0 ( -107.25 by residue)
QMean score : 0.418
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