Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSIKKSVIGFCLGAAALSMFACVDSSQSVMAAEKDKVEITWWAFPTFTQEKAKDGVGTYEKKVIKAFEKKNPNIKVKLETIDF-TSGPEKITTAIEAGTAPDVLFDAPGRII-QYGKNGKLADLNDLFTDQFIKDVNNKNIIQASKSGDKAYMYPISSAPFYMAFNKKMLKDAGVLKLVKEGWTTSDFEKVLKALKNKGYTPGSFFANGQGGDQGPRAFFA-NLYSAPITDKEVTKYTTDTKNSVKSMKKIVEWIKK-GYLMNGSQYDGSADIQNFANGQTAFTILWAPAQPKTQAKLLESSKVDYLEVPFPSEDGKPDLEYLVNGFAVFNNKDENKVKASKKFITFIADDKKWGPKDVIRTGAFPVRTSFGD-LYKG--D----KR-MMKISKWTQYYSPYYNTID-GF-SEMRTLWFPMVQSVSNGDEKPADALKDFTQKANDTIKKAAK |
| 2W7Y Chain:A ((38-428)) | ------------------------------------EVLEFYHGYHHSEDE--WPVAKTMRDLYDKFAEEH--SGVEFKPTPVNGDLKDIMNNKVASGEFPDVIDLAGNAVSLAAIEQKLVLDLKPYIDSNKLEKNVGLNYKQ-NQKDGKIYTVHEQLFTMGLWYNKDIFAKAGAKT-PDQWNTWDDFTQAMASIRKQDGVYAF-GAG-EPSIRLFNTVLGTTENGRKLLDKPLTKEGIESKEFADALKMVMKEIQANGSKNA--GGDANAYSKDFQEGKSAVFFNGVWASGEMSK----NPSLAPGIYPAGVA-----ISSSGGGITISSKMSEAKQKLALEFLKYMTSDDVQ-KVIFEKVGANPSNENVNVKELSEKSSEATTKILGQAITQVKNA-KAVVPTVSDVWGGDVHTAIINALTESAAENVDVDQKVKSTQDVLKSL------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2W7Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -38322 for 3220 contacts (-11.9/contact) +
2D Compatibility (PS) -39284 + (NN) -12630 + (LL) 3808
1D Compatibility (HY) -4400 + (ID) 2550
Total energy: -93378.0 ( -29.00 by residue)
QMean score : 0.396
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