Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLLVVGSGGREHAIAKKLLASKD-VDQVFVAPGNDGMTLD-GLDLVNIGISEHSRLIDFAKENEIAWTFIGPDDALAAGIVDDFNSAGLRAFGPTKAAAELEWSKDFAKEIMVKYNVPTAAYGTFSDFEKAKAYIEEQGAPIVVKADGLALGKGVVVAETVEQAVEAAQEMLLDNKFGDSGARVVIEEFLDGEEFSLFAFANGDKFYIMPTAQDHKRAFDGDKGPNTGGMGAYA-PVPHLPQSVVDTAVETIIKPVLEGMIAEGRPYLGVLYAGLILTADGPKVIEFNSRFGDPETQIILPRLTSDFAQNIDDIMMGIEPYITW-QKDGVTLGVVVAS---EGYPLDYEKGVPLPEKT---D-GDIITYYAGAKFAENSKALLSNGGRVYMLVTTEGSVKAGQDKIYTQLAQQDTTGLFYRNDIGSKAIK |
| 3LP8 Chain:A ((22-440)) | MNVLVIGSGGREHSMLHHIRK--STLLNKLFIAPGREGMSGLAD-IIDIDINSTIEVIQVCKKEKIELVVIGPETPLMNGLSDALTEEGILVFGPSKAAARLESSKGFTKELCMRYGIPTAKYGYFVDTNSAYKFIDKHKLPLVVKADGLAQGKGTVICHTHEEAYNAVDAMLVHHKFGEAGCAIIIEEFLEGKEISFFTLVDGSNPVILGVAQDYKTIGDNNKGPNTGGMGSYSKPNII-TQEMEHIIIQKIIYPTIKAMFNMNIQFRGLLFAGIIIKKNEPKLLEYNVRFGDPETQSILPRLNSDFLKLLSLTAKGKLGNESVELSKKAALCVVVASRGYPGEYKK---NSIINGIENIEKLPNVQLLHAGTRREG--NNWVSDSGRVINVVAQGENLASAKHQAYAALDLLDWPDGIYRYDIGSC--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LP8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -198650 for 3658 contacts (-54.3/contact) +
2D Compatibility (PS) -45868 + (NN) -23546 + (LL) 700
1D Compatibility (HY) -28400 + (ID) 7500
Total energy: -303264.0 ( -82.90 by residue)
QMean score : 0.503
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