Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRIKWFSLVRITGLLLVLLYHFFKNSFPGGFVGVDIFFTFSGFLITALLIDEFSKTKKIDFVSFCRRRFYRIFPPLVLMVLVTIPFVFLVKSDFRASIGSQIMTALGFTSNFYEILTGGNYESQFIPHLFVHTWSLSIEVHFYVLWGLTVWLLSKRSKDQKQLRGTLFLISMGVFGVSFLTMFVRAFFVDNFSTIYFSTLSHIFPFFLGAMVATISGIREITGRFKKNIKNLTLKHNLIMMGSAFAGLMILTFALDFDNRLTYLFGFVLSSIFASVMIYNARILHEHTPDISEPFVITYLADISYGMYLFHWPFYIIFSRLSPNWIAVILTVVLSAVFSTLSFYIIEPFILGRKPKFLDYEFDLLPYKKWLFSIGGVLTLITVVTMLTAPSIGSFETELLQNSLQQARTNTNRTHTLAAGDAGALSDVTVIGDSVALRSSAAFNKLLPEVQLDAAVSRNFSKSFDIFENRIQNKALS---KIVVLAVGVN----SLDNYKTDLSQFIKSLPK---GHRLIIVTPY---------NAKNMSQVTTVRDYELSLMKKYNYITVADWYKVATEHPEIWGNTDGVHYSDSDTTGADLYVSNVKKAIQKSAQRAAK
4H08 Chain:A ((1-200))---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GREYIEWSDIWIPGANKTDLPHVLLIGNSITRGYYGKVEAALKEKAYVGRLSNSKSVGDPALIEELAVVLKNTKFDVIHFNNGLHGFDYTEEEYDKSFPKLIKIIRKYAPKAKLIWANTTPVRTGEGMKEFAPITERLNVRNQIALKHINRASIEVNDLWKVVIDHPEYYAGGDGTHPI---DAGYSALANQVIKVIKNVLVH---


General information:
TITO was launched using:
RESULT:

Template: 4H08.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -68060 for 1409 contacts (-48.3/contact) +
2D Compatibility (PS) -19415 + (NN) -4732 + (LL) 34456
1D Compatibility (HY) -5200 + (ID) 1650
Total energy: -64601.0 ( -45.85 by residue)
QMean score : 0.444

(partial model without unconserved sides chains):
PDB file : Tito_4H08.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4H08-query.scw
PDB file : Tito_Scwrl_4H08.pdb: