Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNLLIMGLPGAGKGTQAAKIVEEFGVAHISTGDMFRAAMANQTEMGRLAKSYIDKGELVPDEVTNGIVKERLAEDDIAEKGFLLDGYPRTIEQAHALDATLEELGLRLDGVINIKVDPSCLIERLSGRIINRKTGETFHKVFNPP-----VDYKEEDYYQREDDKPETVKRRLDVNIAQGEPILEHYRKLGLVTDIEGNQEITEVFADVEKALLELK
4MKF Chain:B ((1-216))MNLVLMGLPGAGKGTQGEKIVEDYGIPHISTGDMFRAAMKEETPLGLEAKSYIDKGELVPDEVTIGIVKERLGKDD-CERGFLLDGFPRTVAQAEALEEILEEYGKPIDYVINIEVRKDVLMERLTGRRICSVCGTTYHLVFNPPKTPGICDKDGGELYQRADDNEETVSKRLEVNMKQMQPLLDFYSEKGYLANVNGEQDIEDVYADVKDLLGGLK


General information:
TITO was launched using:
RESULT:

Template: 4MKF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -68517 for 1636 contacts (-41.9/contact) +
2D Compatibility (PS) -22855 + (NN) -9862 + (LL) 204
1D Compatibility (HY) -22800 + (ID) 6250
Total energy: -130080.0 ( -79.51 by residue)
QMean score : 0.510

(partial model without unconserved sides chains):
PDB file : Tito_4MKF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4MKF-query.scw
PDB file : Tito_Scwrl_4MKF.pdb: