Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAVFNKLFKRRHSVSEEIKKDDLQEEVEATETEETVEEVIEEIPEKSELELANERADEFENKYLRAHAEMQNIQRRSSEERQQLQRY--RSQDLAKAILPSLDNLERALAVEGLTDDVKKGLEMTRDSLIQALKEEGVEEVEVDSFDHNFHMAVQTLPADDEHPADSIAEVFQKGYKLHERLLRPAMVVVYN |
2V66 Chain:B ((9-75)) | ---------------------------------------------QADNQRLKYEVEALKEKLEHQYAQSYKQVSVLEDDLSQTRAIKEQLHKYVRELEQANDDLERAKRATIVSLEDFEQRLNQAIERNAFLESELDEKESLLVSVQ-------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2V66.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 6864 for 248 contacts (27.7/contact) +
2D Compatibility (PS) -7569 + (NN) -5427 + (LL) 7588
1D Compatibility (HY) 1600 + (ID) 400
Total energy: 2656.0 ( 10.71 by residue)
QMean score : 0.562
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