Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKVCYFTGRKTVSGNNRSHAMNQTKRTVKPNLQKVTVLIDGKPKKVWVSARALKSGKVERV
1JO6 Chain:A ((1-45))
--------MFIWTSGRTSSSYRHDEKRNIYQKIRDHDLLDKRKTVT------ALKAGED---
General information:
TITO was launched using:
RESULT:
Template:
1JO6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 5099 for 151 contacts (33.8/contact) +
2D Compatibility (PS) -4559 + (NN) -1504 + (LL) 2092
1D Compatibility (HY) 0 + (ID) 550
Total energy: 578.0 ( 3.83 by residue)
QMean score : 0.423
(partial model without unconserved sides chains):
PDB file :
Tito_1JO6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JO6-query.scw
PDB file :
Tito_Scwrl_1JO6.pdb
: