Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSLIILTVILVLVIVLLITSLYVVKQQTVAIIERFGKYQKTATSGIHIRVPLGIDKIAARVQLRLLQSEIIVETKTKDNVFVTLNIATQYRVNENNVTDAYYKLIKPEAQIKSYIEDALRSSVPKLTLDELFEKKDEIALEVQHQVAEEMSTYGYIIVKTLITKVEPDAEVKQSMNEINAAQRKRVAAQELANADKIKIVTAAEAEAEKDRLHGVGIAQQRKAIVDGLADSIQELKDANVTLTEEQIMSILLTNQYLDTLNTFAINGNQTIFLPNNPEGVEDIRTQVLSALKTR |
3VEA Chain:A ((1-149)) | ---------------------------------------------------------------------------------------MKYQQLENLESGWKWAYLVKKHREGEAITRHIENSAAQDAVEQLMKLENE-PVKVQEWIDAHMN-----------------VNLATRMKQTIRARRKRHFNAEHQHTRKKSIDLEFLVWQRLAVLARRRGNTLSDTVVQLIEDAERKEKYASQMSSLKQDLKDILDK---------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VEA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 21877 for 831 contacts (26.3/contact) +
2D Compatibility (PS) -16186 + (NN) -5214 + (LL) 13692
1D Compatibility (HY) -1200 + (ID) 1250
Total energy: 11719.0 ( 14.10 by residue)
QMean score : 0.312
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