Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLFSEIFKFCISILWYFILTKNKGVVVMRAWKGIVLILSSIVVTLVAWQNAGLSEFVVPGLALTSLSLTFLLSTKFRILESYFQGIENMYFYHKVMAVFSMILLLLHKIGLGQGGHGSEFAKTIGSAGLYLFLSIVFVAYFGNFLKYEIWRFIHRFVYLVYILGLVHTFLILGDRILGNTLLSLIVLGYAVIGVISGFYIIFLYSRMRFRRVGYVQKVTHLNHDTTEIEIAMKRPYRYDYGQFTFLKIYQAGFESAAHPFSISGGHD-RVIFLTVKA--SGDYTKSIYKQLKVGTKIALDR-AYGHMLFDK--DKKEQVWIAGGIGITPFISFIRENSIL--TKRVDFFYTFSNQDNLIYQDMLESYAKANP--------NFKLHLNNSS----LQGRLDFSQ---SV---------FEGQPTIFMCGPTSMTSTYAKVFRQKD-AKSRLVYEGFSFRDSWLSIFLLKTFDKVYSNLIK |
2BGI Chain:A ((17-258)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DAQTVTSVRHWTDTLFSFRVTRPQTLRFRSGEFVMIGLLDDNGKPIMRAYSIASPAWDEELEFYSIKVPDGPLTSRLQ-HIKVGEQIILRPKPVGTLVIDALLPGKRLWFLATGTGIAPFASLMREPEAYEKFDEVIMMHACRTVAELEYGRQLVEALQEDPLIGELVEGKLKYYPTTTREEFHHMGRITDNLASGKVFEDLGIAPMNPETDRAMVCGSLAFNVDVMKVLESYGLREGANSEPREFVVEKAFVGEGI------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2BGI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -112745 for 1634 contacts (-69.0/contact) +
2D Compatibility (PS) -22438 + (NN) -1755 + (LL) 20852
1D Compatibility (HY) -11200 + (ID) 2000
Total energy: -129286.0 ( -79.12 by residue)
QMean score : 0.429
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