Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MFK--ELVKFIYSSSEGQLKALQSKANALTGE----VTI---SDDVSDIADAWKKRLGLKTVQTALARK----LAYASARHHYKDGKTMLEDISAGKTRRHANSYI------------------------------------------------------------------------------------------------------------------------------------- |
4PQG Chain:A ((6-511)) | HHHMTIYNINLGIGWASSGVEYAQAYRAGVFRKLNLSSKFIFTDMILADNIQHLTANIGFDDNQVIWLYNHFTDIKIAPTSVTVDDVLAYFGGEESHREKNGKVLRVFFFDQDKFVTCYLVDENKDLVQHAEYVFKGNLIRKDYFSYTRYCSEYFAPKDNVAVLYQRTFYNEDGTPVYDILMNQGKEEVYHFKDKIFYGKQAFVRAFMKSLNLNKSDLVILDRETGIGQVVFEEAQTAHLAVVVHAEHYSENATNEDYILWNNYYDYQFTNADKVDFFIVSTDRQNEVLQEQFAKYTQHQPKIVTIPVGSIDSLTDSSQGRKPFSLITASRLAKEKHIDWLVKAVIEAHKELPELTFDIYGSGGEDSLLREIIANHQAEDYIQLKGHAELSQIYSQYEVYLTASTSEGFGLTLMEAIGSGLPLIGFDVPYGNQTFIEDGQNGYLIPSSSDHVEDQIKQAYAAKICQLYQENRLEAMRAYSYQIAEGFLTKEILEKWKKTVEEVLHD |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4PQG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 11349 for 435 contacts (26.1/contact) +
2D Compatibility (PS) -10073 + (NN) -4237 + (LL) 0
1D Compatibility (HY) -2000 + (ID) 1100
Total energy: -6061.0 ( -13.93 by residue)
QMean score : 0.328
|
|
|