Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKVFASPSRYIQGKDALFQSIEHIKSLG-QTPLILCDDVVYN--IVGERFLSYLQ-DDLLPH-RVSFNGEASDNEINRVVAVAKEKNSDLIIGLGGGKTIDSAKAIADKV------------------NLPVVIAPTVASTDAPTSALSVIYTDEGAFE-KYIFYSKNPDLVLVDTQVIAQAPKRLLASGIADGLATWVEARAVLQKNGIAMAGGRQTLAGVAIAQACERTLFNDSLQALAACDAKVVTKALENVIEANTLLSGLGFESAGLAAAHAIHNGFTALSGDIHHLTHGEKVAYGTLTQLFLENR----------------P---------KEEIDRYINLYQAIGMPTTLAELHLGDATYEELLKVGQQATIEGETIHEMPFKISAEDVAAALLTVDRYVSNHQ |
| 3BFJ Chain:A ((7-386)) | --DYLVPNVNFFGPNAISVVGERCQLLGGKKALLVTDKGLR-KDGAVDKTLHYLREAGIEVAIFDGVEPNPKDTNVRDGLAVFRREQCDIIVTVGGGSPHDCGKGIGIAATHEGDLYQYAGIETLTNPLPPIVAVNTTAGTASEVTRHCVLTNTETKVKFVIVSWRNLPSVSINDPLLMIGKPAALTAATGMDALTHAVEAYISKDAN----------PVTDAAAMQAIRLIARNLRQAVALGS---NLQAREYMAYAS-LLAGMAFNNANLGYVHAMAHQLGGLY----DMPHGVANAVLLPHVARYNLIANPEKFADIAELMGENITGLSTLDAAEKAIAAITRLSMDIGIPQHLRDLGVKE---TDFPYMAEMALKD-GNAFSNPRKGNEQEIAAIFRQAF------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3BFJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -155930 for 3100 contacts (-50.3/contact) +
2D Compatibility (PS) -35436 + (NN) -15929 + (LL) 1460
1D Compatibility (HY) -4400 + (ID) 3650
Total energy: -213885.0 ( -69.00 by residue)
QMean score : 0.519
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