Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKQTLKLMFSFLLMLGTMFGISQTVLAQETHQLTIVHLEARDIDRPNP-------QLEI-----APKEGTPIEGVLYQLYQLKSTEDGDLLAHWNSLTIT--ELK--KQA-QQVFEATTNQQGKATFN--QLPDGIYYGLAVKAGEK----------NRNVSAFLVDLSEDK----VIYPKIIWSTGELDLLKVGVDGDTKKPLAGVVFELYEKNGRTPIRVKNGVHSQDIDAAKHLETDSSGHIRISGLIHGDYVLKEIETQSGYQIGQAETAVTIEKSKTVTVTIENKKVPTPKVPSRGGLIPKTGEQQAMALVIIGGILIALALRLLSKHRKHQNKD |
| 2L4O Chain:A ((33-187)) | ----------------------------TTTSVTVHKLLATDGDMDKIANELETGNYAGNKVGVLPANAKEIAGVMFVWTNTNNEIIDE-NGQTLGVNIDPQTFKLSGAMPATAMKKLTEAEGA-KFNTANLPAAKYKIYEIHSLSTYVGEDGATLTGSKAVPIEIELPLNDVVDAHVYPKNTEAKPKILE----------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2L4O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -18194 for 770 contacts (-23.6/contact) +
2D Compatibility (PS) -12683 + (NN) 3253 + (LL) 12804
1D Compatibility (HY) -2800 + (ID) 1150
Total energy: -18770.0 ( -24.38 by residue)
QMean score : 0.372
|
|
|