Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTQEEIDQMIEDWI--SNGFPDELKRLIPDEE
5CMZ Chain:B ((2-33))
MTWEEWDKKIEELIKKSEELIKKIEEQIKKQE
General information:
TITO was launched using:
RESULT:
Template:
5CMZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -16 for 106 contacts (-0.2/contact) +
2D Compatibility (PS) -3141 + (NN) 544 + (LL) 0
1D Compatibility (HY) -2400 + (ID) 550
Total energy: -5563.0 ( -52.48 by residue)
QMean score : 0.528
(partial model without unconserved sides chains):
PDB file :
Tito_5CMZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5CMZ-query.scw
PDB file :
Tito_Scwrl_5CMZ.pdb
: