Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----------MSEFTFEIVEKLLVL-SENEKGWTKELNRVSFNGAPAKFDLRTWSPDHTKMG---KGITLSNEEFKVILDAFRK-
1AQT Chain:? ((2-86))
STYHLDVVSAEQQMFSGLVEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRIVKQHGHEEFIYLSGGILEVQPGNVTVLADTAIRG
General information:
TITO was launched using:
RESULT:
Template:
1AQT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23042 for 400 contacts (-57.6/contact) +
2D Compatibility (PS) -7191 + (NN) 4148 + (LL) 0
1D Compatibility (HY) -2400 + (ID) 550
Total energy: -29035.0 ( -72.59 by residue)
QMean score : 0.270
(partial model without unconserved sides chains):
PDB file :
Tito_1AQT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AQT-query.scw
PDB file :
Tito_Scwrl_1AQT.pdb
: