Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIMFVAAEGAPFAKTGGLGDVIGALPKSLSKKGHDVVVVMPYYDMVDQKFGDQIENLMYFYTDVGWRHQYVGVKRLSQDNVTFYFIDNQYYFYRGHVYGDWDDGERFAYFQLAALELMEKI----------NFIPD-VLHVHDYHTAMIPFLLKEKYHWIQAYNNIRTVFTIHNIEFQGQFGPEMLGDLFGVGAE---RYE---DG-TLRWNNCLNWMKAAILYSDRVTTVSPSYANEIKTPEFGKGLDQ--IMRMEAGKLSGIVNGIDSDLLNPETDAFLPYHFSKSNL-EGKIKNKLALQENLGLPQDKNVPLIGIVSRLTDQKGFDIIASELDNMLQQDIQMVILGTGYHHFEETFSYFASRYPEKLSANITFDLRLAQQIYAASDIFMMPSAFEPCGLSQMMAMRYGSLPLVHEVGGLKDTVVAFNQFDGSGTGF----------SFNHFSGYWLMQTLKLALEVYNDY--PEAWKKLQWQAMSKDFSWDTACVAYEQLYQQLQ |
| 3VUE Chain:A ((10-511)) | MNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPRYDQYKDAWDTS--V--VAEIKVADRYERVRFFHCYKRGVDRVFIDHPSFLEK------KDNQMRFSLLCQAALEAPRILNLNNNPYFKGTYGEDVVFVCNDWHTGPLASYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPE-LNLSERFRSSFDFIDGYDTPVEGRKINWMKAGILEADRVLTVSPYYAEELISG-IARGCELDNIM--RLTGITGIVNGMDVSEWDPSKDKYITAKYDATTAIEAKALNKEALQAEAGLPVDRKIPLIAFIGRLEEQKGPDVMAAAIPELMQEDVQIVLLGTGKKKFEKLLKSMEEKYPGKVRAVVKFNAPLAHLIMAGADVLAVPSRFEPCGLIQLQGMRYGTPCACASTGGLVDTVIEGK------TGFHMGRLSVDCKVVEPSDVKKVAATLKRAIK----VVGTPAYEEMVRNCMNQDLSWKGPAKNWENVLLGLG |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VUE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -283424 for 3974 contacts (-71.3/contact) +
2D Compatibility (PS) -49758 + (NN) -27212 + (LL) 1120
1D Compatibility (HY) -32000 + (ID) 8050
Total energy: -399324.0 ( -100.48 by residue)
QMean score : 0.524
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