Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------------------------------MDIFSAIDSKFWASIMENPWMILIHLMDIII---------VAVLIYKFIKALAGTKIMSLIQGVILFIIIRFVSEWIGLTTITFLMNQIVTYGVIAGVVIFAPEIRTGLEKFGRTPQLFTQRSQLSSD-----EKLVDALVKAVAYMS---PRKIGALISIERTQTLQEYIATGIPLDADISSELLINIFIPNTPLHDGAVIVKDKKIATACSYLPLSESSSISKEFGTRHRAAIGLSENSDAL-----TVIVSEETGGISVALKGEFLHDLSK--DSFEA---ILRTQLIQNQEENSKLAWYNQLLRRK- |
| 1XSZ Chain:A ((-1-354)) | ASHPEIEKAQREIIEAFNAKPKNGINKIKEICEQYKISPNEEIAEFFHQQRKNLDLEAVGDYLSSPEAENQQVLKAFTSQMNFNGQSFVEGLRTFLKTFKLPGEAQKIDRLVQSFSGAYFQQNPDVVSNADAAYLLAFQTIMLNTDLHNPSIP---EKNKMTVDGLKRNLRGGNNGGDFDAKFLEELYSEIKAKPFELNFVKTSPGYELTSTTLNKDSTFKKLDSFLHSTDVNINTVFPGIGDNVKTTVDQPKSWLSFFTGYKGTITLTDNKTSAQATIQVYTPNIFSKWLFGEQPRVIIQPGQTKESIDLAAKAAADFSSPVKNFKATYDYEVGDLIKAYDNQKKLITIERNLALKA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1XSZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -126297 for 2102 contacts (-60.1/contact) +
2D Compatibility (PS) -28951 + (NN) -4384 + (LL) 56
1D Compatibility (HY) 3200 + (ID) 1800
Total energy: -158176.0 ( -75.25 by residue)
QMean score : 0.174
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