Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | METYTLSNTLNIPKIGFGTWQLTEGEEAYKAVTHALKVGYTHIDTAQIYGNEHSVGRAIRDSGLARESIFLTTKIWNDKHDYHLAKASIDESLQKLGVDYIDLLLIHWPNPKALRENDAWKA-GNA-GTWKAMEEAYKEGKVKAIGVSNFMKHHLEALFETAEIKPMVNQIILAPGCAQEDLVRFCKGNDILLEAYSPFGTGAI---FENESIKAIAEKYGKSVAQVALRWSLDNGFLPLPKSATPKNIEANLDIFDFQLNEDDITTLIQLDSGIKP-KDPDNVSF |
| 4Q3M Chain:E ((3-274)) | --SVKLNNNYEMPIIGLGTFR-SKKNDAYNAVKAALEGGYRHIDTAMIYGNEEEVGRAIKDSNIPREEIFVTTKLWNTDQGYEKTLEAFNTSLKNLGLDYIDLYLIHW-----------FKGYDNALSTYRAFETLYEEGKVKAIGVSNFNVHHLMYLMENAKIPPMVNQVETHVTLQNHFLHDYCKKNNIQLEAYAPLMSHQIKDLLSNETMAKIAKKHDKTIPQIAIRWLIEREIVVIPKSITPERIVQNFDVFDFTLDEEDMKSIRSVNTGKKIFTEFDNVDY |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4Q3M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -138026 for 2265 contacts (-60.9/contact) +
2D Compatibility (PS) -28788 + (NN) -13443 + (LL) 704
1D Compatibility (HY) -28000 + (ID) 6300
Total energy: -213853.0 ( -94.42 by residue)
QMean score : 0.573
|
|
|