Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKEDIKKQVRRAFDFRMAIRVYNN-NDIPKEDMEYILDTAWLSPSSVGLEGWRFLVLDRQTIAKFRDKLKEVA-WGAQYQLDTASHFVLLLAEKG-AYYNADSMINSLVRRGLGDPAALESRIPLYKSFQENDMKIDSERSLWDWTAKQTYIALGNMMTAAAMIGVDSCPIEGFDYEKVNNILSKEGLIDDKK-EAISCMVSFGYRLREPKHSRARKERQEVITWVE |
| 3GE6 Chain:A ((3-212)) | --TTQTATDFMEIVKGRRSIRNYDTNVKISKEEMTQILEEATLAPSSVNMQPWRFLVIDSEEG---KATLAPLAKFNQV-QVETSSAVIAVFGDMKAIDQLENIYDTAVE-KGLMPQEVRDRQVPAIQG----MYENVPASALKDSILIDSGLVSMQLMLVARAHGYDTNPIGGYEKDQIAEAFGM----E-KDRYVPVMLLSIGKAVDAG-YPSVRLPINDIADWK- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GE6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -83346 for 1473 contacts (-56.6/contact) +
2D Compatibility (PS) -21664 + (NN) 1732 + (LL) 1472
1D Compatibility (HY) -7200 + (ID) 2200
Total energy: -111206.0 ( -75.50 by residue)
QMean score : 0.482
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