Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKNKKDQFIGVKQPLSKKLSQLVFILFFSLFTVFSVLVYTSATRYVLHREKINVGRSLEKTRVRLSQANSSLTSDDILEILYNQVFADDIYPHKRQNGIVRTGESIDSILYANQEMTLYDVNRKPVFSTLRTGMPTIGKSMGKVIISKVADMEGFVGTKAIYSQKTGQLLGYVQIFYNLGRYYSMRQNIIVFLIMMEVLGTVLALVVINSATKRIVRPVKNLHDLMHQISENPSNLEIRSKVRSEDEIGELSRIFDGMLDQLEDYTRRQSQFISDVSHELRTPVAVVKGHIGLLQRWGKDDPEILEESLAAAYHEADRMSLMINDMLNMIRVQGSLELHQDEVTDLSSSISVVIENFRILREDFQFIFENNISDIVWGKIY--KIHFEQALMILIDNAIKYSPSYKEVSVVLSVDNDFATVVVKDKGEGISDEDIEFIFDRFYRTDKSRNRESTQAGLGIGLSVFKQIMDAYHLKVDIKSELNQGTEFIVRIPIKKFEETKEI |
4BIZ Chain:F ((66-296)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FNQMVTALERMMTSQQRLLSDISEELRTPLTRLQLGTALLRRRSGESKE-----LERIETEAQRLDSMINDLLVMSRNQQKNAL-VSETIKANQLWSEVLDNAAFEAEQMGKSLTVNFPPGPW-PLYGNPNALESALENIVRNALRYS--HTKIEVGFAVDKDGITITVDDDGPGVSPEDREQIFRPFYRTD-----------TGLGLAIVETAIQQHRGWVKAEDSPLGGLRLVIWLPLYKR------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4BIZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -120836 for 1548 contacts (-78.1/contact) +
2D Compatibility (PS) -24097 + (NN) -7675 + (LL) 21216
1D Compatibility (HY) -10800 + (ID) 3600
Total energy: -145792.0 ( -94.18 by residue)
QMean score : 0.411
|
|
|