Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSDIGIIVVSHSKNIAQGVVDLISEVAKDVSITYVGGTEDGEIGTSFDQVQQIVEQNDKKTLLAFFDLGSAKMNLELVADFSEKNIIINSVPVVEGAYTAAALLQAGADLDSIQSQLAELTINK
3CT6 Chain:A ((1-123))
-MTYGIVIVSHSPEIASGLKKLIREVAKNISLTAIGGLENGEIGTSFDRVMNAIEENEADNLLTFFDLGSARMNLDLVSEMTDKELTIFNVPLIEGAYTASALLEAGATFEAIKEQLEKMLIEK
General information:
TITO was launched using:
RESULT:
Template:
3CT6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -96699 for 983 contacts (-98.4/contact) +
2D Compatibility (PS) -13425 + (NN) -5362 + (LL) 208
1D Compatibility (HY) -14400 + (ID) 3300
Total energy: -132978.0 ( -135.28 by residue)
QMean score : 0.674
(partial model without unconserved sides chains):
PDB file :
Tito_3CT6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3CT6-query.scw
PDB file :
Tito_Scwrl_3CT6.pdb
: