Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLTMIKNGDSIAVVNGDIELSYKDIDRQSNSFANGLLKAGFKCGDKIVLQLPNYHEFIIIAFAMFKVGIIPIMSLPAHRKNELKGIIEKSEAVAYIAKDKYLGFS---YVDMIRDIKIESDREFKVYILGEGDEFK--KFSELNDNNYI-YQKTEVDYKNIGLLLLSGGTTRIPKLIPRRHCDYLYVAKKTSIISGMDRGSIYLAALPMAHNFPLCCPGILGTFAVGGKVVVCEVTSPDEILPLIEEEKVTITGFVPAIANICMD-YLQYEDYDLSSLKIL |
| 3U17 Chain:B ((46-312)) | ---------SLAIICGERQLSYIELDRLSTNLATRLAEKGLGKGDTALVQLPNVAEFYIVFFALLKAGVVVLNALYSHRQYELNAFIKQIQPKLLIGSRQHEVFSNNQFIDSLHDVNLSP--EIILMLNHQATDFGLLDWIETPAETFVDFSSTPAD--EVAFFQLSGGSTGTPKLIPRTHNDYDYSVRASAEICGLNSNTRLLCALPAPHNFMLSSPGALGVLHAGGCVVMAPNPEPLNCFSIIQRHQVNMASLVPSAVIMWLEKAAQYKD-QIQSLKLL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3U17.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -201302 for 2130 contacts (-94.5/contact) +
2D Compatibility (PS) -27818 + (NN) -5243 + (LL) 856
1D Compatibility (HY) -20000 + (ID) 4300
Total energy: -257807.0 ( -121.04 by residue)
QMean score : 0.452
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