Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNLKQAFIENDSIRLKLSASDWKEAIKLSIDPLIESGAVDAEYYDAIIESTEEFGPYYILMP-GMAMPHARPEAGVKRDAFSLITLTEPVVF------PDGKEVSVLLALAATSSAIHTSVAIPQIIALFELENSIQRLTECQEAKEVLAMVEESKNSPYLEGLDLES
1XIZ Chain:A ((-1-153))
-AMQDIHFRRHYVRHLPKEVSQNDIIKALASPLINDGMVVSDFADHVITREQNFPTGLPVEPVGVAIPHTDHKY-VRQNAISVGILAEPVNFEDMGGEPDPVPVRVVFMLALGESNKQLNV-LGWIMDVIQDEDFMQQLLVMNDDEIYQSIYTRISE-----------
General information:
TITO was launched using:
RESULT:
Template:
1XIZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -84533 for 1128 contacts (-74.9/contact) +
2D Compatibility (PS) -15721 + (NN) -4056 + (LL) 564
1D Compatibility (HY) -9200 + (ID) 1850
Total energy: -114796.0 ( -101.77 by residue)
QMean score : 0.495
(partial model without unconserved sides chains):
PDB file :
Tito_1XIZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XIZ-query.scw
PDB file :
Tito_Scwrl_1XIZ.pdb
: