Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIKYQDDFYQAVNGEWAKTAVIPDDKPRTGGFSDLADDIEALMLSTTDKWLADENKPSDTILNHFIAFHKMTADYQKREEVGVSPVLPLIEEYKGLQSFSEFASKVAEYELEGKPNEFPFGVAPDFMNAQLNVLWAEAPGIILPDTTYYSEDNEKGKELLAFWRKSQEDLLPLFGLSEQEIKDILDKVLALDAKLAQYVLSREESSEYVKLYHPYNWEDFTKLAPELPLDAIFQKILGQKPDKVIVPEERFWTEFASDYYSESNWELLKADLILSAANAYNAYLTDDIRIKSGVYSRALSGTPQAMDKKKAAYYLASGP------YNQALGLWYAGEKFSP-------EAKAD-------VEHKIATMIDVYKSRLEKADWLAQSTREKAIM-----------KLNVITPHI----GYPEKLPETYTKKIIDPKLSLVENATNLDKISIAYGWSKWNKPVDRSEWHMPAHMVNAYYDPQQNQI--VFPAAILQEPFYALEQSSSANYGGIGAVIAHEISHAFDTNGASFDEHGSLNNWWTDEDFEAFKKLTDKVVEQFDGLESYGAKVNGKLTVSENVADLGGVACALEAAQRESDFSARDFFINFATIWRMKARDEYMQMLASVDVHAPAQWRTNITVTNFEEFHKEFDVKDGDNMWRPVEKRVIIW----------------------------------- |
| 4XVK Chain:A ((1-666)) | -KKHFCDIRH--LDDWAKSQLIEMLKQ-------AAALVITVMYTDGSTQLGADQTPVSSVRGIVVLVKRQACGPVLEGFVSDDPCIYIQIEHSAIWD-----------QEQEAHQQFARNVLFQTMKCKCPVICFNAKDFVRIVLQFFGNDG-----------------------SWKHVADFI----GLDPRIAAWLIDPSDATPSFEDLVEKYCEKSITVKVNSTYGNSSRNIVNQNVRENLKTLYRLTMDLCSKLKDYGLWQLFRT-LELPLIPILAVMESHAIQVNKEEMEKTSALLGARLKELEQEAHFVAGERFLITSNNQLREILFGKLKLHLLSYPSTSEAVLNALRDLHPLPKIILEYRQVHKIKSTFVDGLLACMKKGSISSTWNQTGTVTGRLSAKHPNIQGISKHPIQITTPKKILTISPRAMFV---SSKGHTFLAADFSQ-------IELRILTHLSG---DPELLKLDDVFSTLTSQWKDVPVEQVTHADREQTKKVVYAVVYGAGKERLAAC----------LGVPIQEAAQFLESFLQKYKKIKDFARAAIAQCHQTGCVVSIMGRRRPLPRIH-AHDQQLRAQAERQAVNFVVQGSAADLCKLAMIHVFTAVAASHTLTARLVAQIHDELLFEVEDPQIPECAALVRRTMESLEQVQALELQLQVPLKVSLSAGRSWGHLVPLQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XVK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -51586 for 4247 contacts (-12.1/contact) +
2D Compatibility (PS) -58156 + (NN) -7268 + (LL) 4480
1D Compatibility (HY) -16400 + (ID) 4150
Total energy: -133080.0 ( -31.34 by residue)
QMean score : 0.182
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