Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKSKILLQLMQGKIVAVIRGNSQEEAFQAAQACIKGGISAIEIAYTNSKASQVIEQLVTQYTNQEQVVVGAGTVLDSETARMAILAGAKFIVSPAFNLQTAKLCNRYAIPYLPGCMTLSEVTTALEAGCEIIKIFPGGTL-GTSFISSLKAPLPQVQIMVTGGVNLTNAKDWFLSGVTAIGIGGEFNKLA--ALGEFDKITEMAKQYKIQLNLN
1MXS Chain:A ((17-225))
---ARIDAICEKARILPVITIAREEDILPLADALAAGGIRTLEVTLRSQHGLKAIQVLREQR--P-ELCVGAGTVLDRSMFAAVEAAGAQFVVTPGITEDILEAGVDSEIPLLPGISTPSEIMMGYALGYRRFKLFPAEISGGVAAIKAFGGPFGDIRFCPTGGVNPANVRNYMALPNVMCVGTTWMLDSSWIKNGDWARIEACSAEAIALLDAN
General information:
TITO was launched using:
RESULT:
Template:
1MXS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -150256 for 1708 contacts (-88.0/contact) +
2D Compatibility (PS) -23087 + (NN) -16862 + (LL) 552
1D Compatibility (HY) -7600 + (ID) 2700
Total energy: -199953.0 ( -117.07 by residue)
QMean score : 0.629
(partial model without unconserved sides chains):
PDB file :
Tito_1MXS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1MXS-query.scw
PDB file :
Tito_Scwrl_1MXS.pdb
: