Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ---------------------------------------------------------MVSLHDDERLDYLLAED----MKIIQSPTVFAFSLDAVLLSKFA--YVPIQKGKIVDLCTGNGIVPLLLST-RSKADILGVEIQERLHDMAVRSVEYNKLDDQIQIIHDDLKNMPEKLGHNRYDVVTCNPPYFKTPKQTEQNMNEHLRIARHEI-------HCTLEDVISVSSKLLKQGGKAALVHRPGRLLEIFELMKAYQIEPKRVQFVYPKQGKEANTILVEGIKGGRPDLKILPPLFVYDEQNEYTKEIRTILYGDK |
1T43 Chain:A ((2-275)) | EYQHWLREAISQLQASESPRRDAEILLEHVTGRGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWSLPLFVSPATLIPRPDTECLVEQALARLPEQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWF----SALAGQQFAMIVSNPPY--IDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFILAGYHDVETCRDYGDN--------------------------------------ERVTLGRY |
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General information:
TITO was launched using:
| RESULT:
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Template: 1T43.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -63732 for 1665 contacts (-38.3/contact) +
2D Compatibility (PS) -21552 + (NN) -11532 + (LL) 2292
1D Compatibility (HY) -1600 + (ID) 2000
Total energy: -98124.0 ( -58.93 by residue)
QMean score : 0.308
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