Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQFQIGDMVARKSYQMDVLFRIIGIEQTSKGNSIAILHGDEVRLIADSDFSDLVAVKKDEQMMRKKKDESRMNESLELLRQDYKLLREKQEYYATSQYQHQEHYFHMPGKVLHLD---GDEAYLKKCLNVYKKI--GVPVYGIHCHEKKMSASIEVLLDKYRPDILVITGHDAYSKQKGGIDDLNAYRHSKHFVETVQTARKKIPHLDQLVIFAGACQ--SHFESLIRAGANFASSPSRVNIHALDPVYIVAKISFTPFMERINVWEVLRNTLTREKGLGGIETRGVLRIGMPYKSN |
4Z87 Chain:A ((276-415)) | --------------------------------------------------------------------------------------------------------------VVVLDSSQGNSVFQINMIKWIKETFPDLQVIAGNVVT---R-EQAASLIHAGADGLRIGMGSGSICITQEVMA--CGRPQ---GTAVYNVTQFANQFGVPCIADGGVQNIGHITKAIALGASTVMMG------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Z87.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -58585 for 904 contacts (-64.8/contact) +
2D Compatibility (PS) -12028 + (NN) -6792 + (LL) 13996
1D Compatibility (HY) -2400 + (ID) 950
Total energy: -66759.0 ( -73.85 by residue)
QMean score : 0.425
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