Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
------MGRRRGVMSDEFKYEL-------AKDLGFYDTVKNGGWGEIRARDAGNMVKRA--IEIAEQQMAQNQNNR
3MOJ Chain:B ((404-478))
MKLYFNGGKKKKIRAVDFVGTIAKIDGVSADDIGIITIMDNASYVEILNGKGPHVLKVMKNTTVKGKQLKVNKAN-
General information:
TITO was launched using:
RESULT:
Template:
3MOJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2596 for 355 contacts (7.3/contact) +
2D Compatibility (PS) -6052 + (NN) 1353 + (LL) 100
1D Compatibility (HY) -3600 + (ID) 600
Total energy: -6203.0 ( -17.47 by residue)
QMean score : 0.200
(partial model without unconserved sides chains):
PDB file :
Tito_3MOJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3MOJ-query.scw
PDB file :
Tito_Scwrl_3MOJ.pdb
: