Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | --MDDSIGVKRHWIWQGAFVLILA--------------GVITKILSAVYRVPFQNIVGDVGFYIYQQVYPF----LGIAVMLSTSG-------------FPVIISKLMNDYSEKNHHTILKISALFLSL-IGILLFLCLYLGAVPIALFMGDSHLAVLIQVAAYAFLLFPFVALLRGGFQGRHEMLPSALSQMTEQFLRVAVLLGLSFWLVK----KGASLYTAGAAAASGSLAGSLVALIILGFFWFKTKRDNQ----TDRQNEN---VITTKELTKKLLLYS----VTICVSSLLLLFIQLVDALNLYALLSGGEASEEAKCLKGIYDRGQPLLQLGSVFAVSIATSLVP-------YISMAVKNKE-----LKIMKEKITSS-----LKLCLVLGTGASAGLICILKPVNIMLFQNGEGTGALQVFSCSILFASLAVTAAAV------------LQGAGYTVFPAIAVGAGVAVKWVLNTLLVP-------RYGIEGASLATAASFAAVAGLNLYQLRQKEWLDKLRGVLIPIIGSALLMSAVLLAYTRLWTFLFPATGRGAAVIESLSAVAIGGAVFIYCMMRLGIFTDEELNSVPFGSKLSKFMRRREQNGG |
5FQE Chain:A ((28-607)) | TTLGASIGSTDFHYLQKDYDEIKKLNLNTWNEVAWIGDELNSKIVMWTNSSPVNNVTLSSSDFINENGDLISSNNIKISWLKETLANIGRSNPSAPLEPFPDIIHNSGSLNIEKN-----KIASAWINIKIPRNAKPGIYNGSIEVTADELEKS-----YTFDYSFEVLNLV-----------QPLPSETNTQIEFWQHPYTIARYYKICKEDLFTEKHFKYLRGNLKEYRNMGGRGVIATIVHEAWNHQSYDSDPSMIKWRKNSYGTFEFDYSHFDKWIQLNIDLGILDPEKGFGQIKCYSIVPWNNRIQYFNEATNKEEAINPTP---GSDLWINIWTQFLTSFMSHLEEKGWFNITYISMDERSMDDLKACVDLIENITNNSYEHFKISSAMDYESGNDYSFLDRIDDISIGLSHINHNSDDMKNMATHRQELGLLTTIYTCTGDYPSSFTISDPSEGAFTIWYSLYQNTNGFLRWSWDGWVENPLENVSYKYWEPGDPFLIYPAEKDSIGKTFYST---PRLEKLKEGIRDINKAKYLMEKAPNLKNSIENLIYSLKRPNKGENAYGSAVAAS--------KEDRDLTISEANRIK--NGINNFAREFISLTM |
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General information:
TITO was launched using:
| RESULT:
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Template: 5FQE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -357130 for 3741 contacts (-95.5/contact) +
2D Compatibility (PS) -51245 + (NN) 13712 + (LL) 3208
1D Compatibility (HY) -2800 + (ID) 4050
Total energy: -398305.0 ( -106.47 by residue)
QMean score : 0.155
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