Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAGKITVVGLGAGDMDQLTIGIHKLLTKADTLYVRT-KDHP-LIEELEKETKNIRFFDDIYEKHDQFEAVYEEIADILFEAA-RREDVVYAVPGHPFVAEKTVQLLTERQEKENVQVKVAGGQSFLDATFNVLQIDPIE-----GFQF--VDAGTLS------ADELELRHHLIICQVYDQMTASEVKLTLME-KLPDDYEVVIVTAAGSRGEEIRTVPLFELDRNV---ALNNLTSVYIPPIKEEKLLYHEFSTFRSIIRELRGPNGCPWDKKQTHQSLKQYMIEECYELLEAIDEEDTDHMIEELGDVLLQVLLHAQIGEDEGYFTIDDVIKGISEKMVRRHPHVFKDVKVQDENDVLANWEDIKKAEKNTSESSLLDSVPKTLPALSKAAKLQKKAAKVGFDWEDVSDIWEKVSEEMKEFSSEVSEAPHEHNLKAEFGDILFALVNVARFYKIEPEEALTMTNDKFRRRFSYIEETAKEEGVELADMSLEDMDKLWNEAKETERRS |
| 1CBF Chain:A ((19-248)) | SHMKLYIIGAGPGDPDLITVKGLKLLQQADVVLYADSLVSQDLIAKSKP-GAEVLKT---------AGMHLEEMVGTMLDRMREGKMVVRVHTGDPAMYG-AIMEQMVLLKREGVDIEIVPGVTSVFAAAAAAEAELTIPDLTQTVILTRAEGRTPVPEFEKLTDLAKHKCTIALFLSSTLT--KKVMKEFINAGWSEDTPVVVVYKATWPDEKIVRTTVKDLDDAMRTNGIRKQAMILAGWA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1CBF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -155028 for 1648 contacts (-94.1/contact) +
2D Compatibility (PS) -22786 + (NN) -7270 + (LL) 21112
1D Compatibility (HY) -3600 + (ID) 1800
Total energy: -169372.0 ( -102.77 by residue)
QMean score : 0.510
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