Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRLDKFLKVSRLIKRRTLAKEVADQGRISINGNQAK-ASSDVKPG--DELTVRFGQKLVTVQVNELKDTTKKEEAANMYTILKEEKLGE
2CQJ Chain:A ((109-164))
RRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAFLVTRSMEDFVTWVDSS---------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2CQJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -14306 for 342 contacts (-41.8/contact) +
2D Compatibility (PS) -5583 + (NN) -1017 + (LL) 3000
1D Compatibility (HY) -2000 + (ID) 500
Total energy: -20406.0 ( -59.67 by residue)
QMean score : 0.497
(partial model without unconserved sides chains):
PDB file :
Tito_2CQJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2CQJ-query.scw
PDB file :
Tito_Scwrl_2CQJ.pdb
: