Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNSYYDQKGSSSVPEQHDVTMKGRKHLDISGVKHVESFDNEEFLLETVMGMLSVRGQNLQMKNLDVEKGIVSIKGRVFDLVYLDEQQGDKAKGFFSKLFK
3IPF Chain:A ((22-90))
----------------------NRQFLSLTGVSKVQSFDPKEILLETIQGVLSIKGEKLGIKHLDLKAGQVEVEGLIDALVYPLEHHHHHH---------
General information:
TITO was launched using:
RESULT:
Template:
3IPF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22257 for 468 contacts (-47.6/contact) +
2D Compatibility (PS) -7089 + (NN) -211 + (LL) 1460
1D Compatibility (HY) -7200 + (ID) 1400
Total energy: -36697.0 ( -78.41 by residue)
QMean score : 0.514
(partial model without unconserved sides chains):
PDB file :
Tito_3IPF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IPF-query.scw
PDB file :
Tito_Scwrl_3IPF.pdb
: