Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAQRRPAGKKIPFQKDSFLQQFEKLAQSRKHHVLLESA----RGGRYSIAGLDPIATVKGKDGITTIKHGD--EM--------------------------------------LFKEGDPLRAFHSWFKTLETETNHE-FP-DFQGGAIGFLSYDYARY-IENFKMLSLDDLETPDIYFLVFDDIAVYDHQEESLWLITHVN---GSDQETADVKLSELEQMWLTELPAVTSREMKPETAGSFAAPFTEDGFSQAVEKIKQYIASGDVFQVNLSIRQSQSLSVHPYQIYKTLREVNPSPYMAYLETPDFQIICGSPELLVSKK--GKLLETRPIAGTRSRGKT------NEEDEALANELIHNEKERAEHVMLVDLERNDLGRVSRYGSVRVNEFMAIEKYSHVMHIVSNVQGELQDGYDAVDIIHAVFPGGTITGAPKVRTMEIIEELEPTRRGLYTGSIGWFGYNHDLQFNIVIRTIYATGGQAFMQSGAGVVIDSVPKHEYKESFKKAFAMQRALELSEEETKIR |
| 1I1Q Chain:A ((18-516)) | --------------RENPTALFHQVCGDRPATLLLESADIDSKDDLKSLLLVDSALRITALGDTVTIQALSDNGASLLPLLDTALPAGVENDVLPAGRVLRFPPVSPLLDENARLCSLSVFDAFRLLQGVVNI--PTQEREAMFFG---GLFAYDLVAGFEALPH-L-EAGNNCPDYCFYLAETLMVIDHQKKSTRIQASLFTASDREKQRLNARLAYLSQQLTQPAPPL---PVTPVPDMRCECNQSDDAFGAVVRQLQKAIRAGEIFQVVPSRRFSLPCP-SPLAAYYVLKKSNPSPYMFFMQDNDFTLFGASPESSLKYDAASRQIEIYPIAGTRPRGRRADGTLDRDLDSRIELDMRTDHKELSEHLMLVDLARNDLARICTPGSRYVADLTKVDRYSYVMHLVSRVVGELRHDLDALHAYRACMNMGTLSGAPKVRAMQLIADAEGQRRGSYGGAVGYFTAHGDLDTCIVIRSALVENGIATVQAGAGIVLDSVPQSEADETRNKARAVLRAIATAHHA---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1I1Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -123919 for 3739 contacts (-33.1/contact) +
2D Compatibility (PS) -47753 + (NN) -21354 + (LL) 2196
1D Compatibility (HY) -22000 + (ID) 7000
Total energy: -219830.0 ( -58.79 by residue)
QMean score : 0.433
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