Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNNIAYIALGSNIGDRETYLRQAVALLHQHAAVTVTKVSSIYETDPVGYEDQAQFLNMAVEIKTSLNPFELLELTQQIENELGRTREV-RWGPRTADLDILLFNRENIETEQLIVPHPRMYERLFVLAPLAEICQQVEKEATSAETDQEGVRVWKQKSGVDEFVHSES
3IP0 Chain:A ((2-135))
---VAYIAIGSNLASPLEQVNAALKALGDIPESHILTVSSFYRTPPLGPQDQPDYLNAAVALETSLAPEELLNHTQRIELQQGRVRKAERWGPRTLDLDIMLFGNEVINTERLTVPHYDMKNRGFMLWPLFEIAPEL-------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3IP0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -101942 for 1016 contacts (-100.3/contact) +
2D Compatibility (PS) -13766 + (NN) -3434 + (LL) 2088
1D Compatibility (HY) -9600 + (ID) 3200
Total energy: -129854.0 ( -127.81 by residue)
QMean score : 0.613
(partial model without unconserved sides chains):
PDB file :
Tito_3IP0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IP0-query.scw
PDB file :
Tito_Scwrl_3IP0.pdb
: