Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSLKHFIQDALSSWMKQKGPESDIVLSSRIRLARNFEHIRFPTRYSNEEASSIIQQFEDQFSEQEIPGIGKFVLIRMNDAQPLEKRVLVEKHLISPNL---TE-------S-PFGGCLLSENEEVSVMLNEEDHIRIQCLFPGFQLLEAMKAANQVDDWIEEKVDYAFNEQRGYLTSCPTNVGTGLRASVMMHLPALVLTRQINRIIPAINQLGLVVRGIYGEGSEAV--GNIFQISNQITLGKSEQDIVEDLNSVAAQLIEQERSAREAIYQTSKIELE-----DRVYRSYGVLSNCRMIESK--ETAKCLSDVRLGIDLGIIKGLSSNILNELMILTQPGFLQQYSGGALRPNERDIRRAALIRERLHLEMNGKRQEDESI |
4RF6 Chain:A ((117-424)) | -----------------LDPANRYIRSTRIRVARSLKGYGLAPGVTKAHRLEIEKKVVGVLTSLT--GDLAGKYYPLSGMDEKTRQQLVDDHFLFKKGDRFLEAAGINKEWPEGRGIYHNNDKTFLVWLNEEDHLRIISMEKGSDIGSVFSRLCRAVNEIDKKLGFQHTKKHGYLTSCPSNLGTGMRASVHVKIPHAKEHP---DFENILTKYHIQARGI--------EDAGVYDISNRRRLGLSEVQCVQDMYDGVKALMELEKEAIAKKRSVFPEVLKNPEVKSLLRKYLTPELFDSLKDKKTAKGISLYDCINSGV---------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RF6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -108427 for 2026 contacts (-53.5/contact) +
2D Compatibility (PS) -28937 + (NN) -7163 + (LL) 6544
1D Compatibility (HY) -10800 + (ID) 3050
Total energy: -151833.0 ( -74.94 by residue)
QMean score : 0.508
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