Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTITLYNTLTRQKETFVPLEEGKVKMYVCGPTVYNYIHIGNARPAIVYDTVRNYLEYKGYDVQYVSNFTDVDDKLIKAANELGEDVPTISERFIKAYFEDVGALGCRKADLHPRVME--NMDAIIEFVDQLVKKGYAYESEGDVYFKTRAFEGYGKLSQQSIDELR------------SGARIRVG------EKKEDALDFA---------LWKAAK----------EG----EISWD----SPWGKGRPG-----WHIECSAMVKKYL----------------------GDQIDIHAGGQDLTFPHHENEIAQSEALTGKTFAKYWLHNGYINIDNEKMSKSLGNFVLVHDIIKQHDPQLLRFFMLS-VHYRHPINYSEELLENTKS--AFSRLKTAYSNLQHRLNSSTN-------LTEDDDQWLEKVEEHRKAFEEEMDDDFNTANAISVLFDLAKHANYYLQKDHTAD------HVITAFIEMFDRIVSVLGFSLGEQELLDQEIEDLIEKRNEARRNRDFALSDQIRDQLKSMNIILEDTAQGTRWKRGE |
3KFL Chain:A ((31-518)) | --------------------------TTPIYYVNASPHIGHVYSTLIVDVLGRYHRVKGEEVFVMTGTDEHGQKVAEAAAKQGVSPMDFTTSVSSEFKQCFQEMNYD-MNYFIRTTNPTHEKLVQDIWKKLAAKGDIYLGKYEGWYSVSDE-SF--LTAQNVADGVDRDGKPCKVSLESGHVVTWVEEENYMFRLSAFRERLLKYFHDHPNCIVPEFRRREVIKTVEKGLFDLSISRKRESVMNWSIPVPGDERHCIYVWLDALFNYYTGALTRVATDGTETLDEDHHALNRWPADVHVVGKDILKFHAIYWPAFLMSA-ELPLPERLVSHGWWTKDHKKISKSLGNAFDPVEKAKEFGIDALKYFLMRESNFQDDGDYSDKNMVARLNGELADTLGNLVSRCVAPKINVNGMWPEPAEYSESDKTLIASLNNLAGTVDHYYC-LPDIQHALIAIFDVLRSLNAYVTENAPWKLVKMDTARLGTVLYVTMEGLRICTMFLQP--VMPQKAKEIMDALGVPEA---------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KFL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -148240 for 3129 contacts (-47.4/contact) +
2D Compatibility (PS) -42192 + (NN) -15902 + (LL) 4868
1D Compatibility (HY) -14000 + (ID) 3050
Total energy: -218516.0 ( -69.84 by residue)
QMean score : 0.406
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