Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNLVLMGLPGAGKGTQGERIVEDYGIPHISTGDMFRAAMKEETPLGLEAKSYIDKGELVPDEVTIGIVKERLGKDDCERGFLLDGFPRTVAQAEALEEILEEYGKPIDYVINIEVDKDVLMERLTGRRICSVCGTTYHLVFNPPKTPGICDKDGGELYQRADDNEETVSKRLEVNMKQTQPLLDFYSEKGYLANVNGQQDIQDVYADVKDLLGGLKK
4TYP Chain:B ((1-212))
MNIVLMGLPGAGKGTQAEKIVAKYGIPHISTGDMFRAAMKEETPLGLEAKSYIDKGELVPDEVTIGIVRERLS------GFLLDGFPRTVAQAEALEEILEEMGRKLEHVIHIDVRQEELMERLTGRRICSVCGTTYHLVFNPPKTPGICDKDGGELYQRADDNEETVAKRLEVNMKQMKPLLAFYDSKEVLRNVNGEQDMEKVFKDLRELL-----
General information:
TITO was launched using:
RESULT:
Template:
4TYP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -79306 for 1585 contacts (-50.0/contact) +
2D Compatibility (PS) -23072 + (NN) -16997 + (LL) 132
1D Compatibility (HY) -27600 + (ID) 8450
Total energy: -155293.0 ( -97.98 by residue)
QMean score : 0.528
(partial model without unconserved sides chains):
PDB file :
Tito_4TYP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4TYP-query.scw
PDB file :
Tito_Scwrl_4TYP.pdb
: