Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MATGGLAIIQSMKHKLPPSERKLADYILAHPHKAIESTVNEISALANSSDAAVIRLCKSLGLKGFQDLKMRVAGDLAKPTFQGYRDIVPHEPLPSISEKTAGNAIQAIQDTSDLMDYKELERAVSLLLKAHTVHFIGLGASGIVAKDAQQKWLRIHKQATAFTDTHLVASLIANADKDDIVFAISFSGETQEIVELFAMAKEKGITTISLTQFSQTSVSALADVPLYTAHSNEALI-R----SA--ATSSRLAQLFIIDVLFLGMAAEQYETTTGYIDKTRAAIQSMRIK |
| 1VIM Chain:A ((15-185)) | -------------------------------------------------------------------------------------------------LRFLEVVSEHIKNLRNHIDLETVGEMIKLIDSARSIFVIGAGRSGYIAKAFAMRLMHLGYTVYVVGETV-----TPRITDQDVLVGISGSGETTSVVNISKKAKDIGSKLVAVTGKRDSSLAKMADVVMVVKGKMKQERDEILSQLAPLGTMFELTAMIFLDALVAEIMMQKHLTE----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VIM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -88597 for 1310 contacts (-67.6/contact) +
2D Compatibility (PS) -17818 + (NN) -9219 + (LL) 8400
1D Compatibility (HY) -9200 + (ID) 1700
Total energy: -118134.0 ( -90.18 by residue)
QMean score : 0.426
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