Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTQDISLSFYKPEHLPELQSFTLTNDDKRFTSL-----P----KEVLSQALGIQDRYPVVILKDDLPVGFFILHASKETLASYSNNPFALLLSSLSLTAVHHGKGYAKKAMLLLPAFVSGYFPWCDEIILAVNHLNIRAKHLYMKSGFLDKGRRRIGPLGEQLILHHFL
2Z10 Chain:A ((10-154))
-GRHVRLEPLALAHLPAFLRHY-DPEVYRFLSRAPVAPTEEALRAHLEGLLGEPGRVNWAILFGKEVAGRISVIAP-EP------EHAKLELG-TMLFKPFWGSPANKEAK-LLLRHAFEV-LRAERVQFKVDLRNERSQRALEALGAVREGVLRK-------------
General information:
TITO was launched using:
RESULT:
Template:
2Z10.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -82084 for 920 contacts (-89.2/contact) +
2D Compatibility (PS) -14793 + (NN) -8508 + (LL) 1872
1D Compatibility (HY) 800 + (ID) 1500
Total energy: -104213.0 ( -113.28 by residue)
QMean score : 0.509
(partial model without unconserved sides chains):
PDB file :
Tito_2Z10.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Z10-query.scw
PDB file :
Tito_Scwrl_2Z10.pdb
: