Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLLFTAVISVPMLLLAVSVLMSVIYDSMFKPMNHGMPFHRSFAYPAMIVVFLISLLLLAFLFSKSIHSLLHKINLLNQTIRHLASDQRVPDKIEVKRADEIGELIKSVNLLIERTTYRELEL----------------------------------------------------------------------------------------------------------------RQQEEIKKELLQKLRHDINTPLTALRLQLFYLEDQCHG----QAVFESLYQQIEYISELTNEFNLYSAETLESSYIVNEEVRLNELLETAVKKWDYLYSMS--GIELHYKPADQDVIWMSNTLWMERLFDNIFQNTLRHSKAKK-MEVTIEH----GDVFIRDDGIGFDRN----------------ESSEGLGLKIIEDTCRLLAITYELHTNDN-GTGFLFSKE |
| 4I5S Chain:A ((37-432)) | --------------------------------------------------------------------NNNQVKQLNAKVRSL-ITGHYTDKLKVEDNSDLSELVNNVNDLSEVFRLTHENLAQEKNRLTSILSYMTDGVLATDRSGKITVINDMAQKQLNVTREQALECNILDILDDDSYTYNDLITKTPEIVLTRRDEYDEFITLRIRFALNRRESGFISGLIAVLHDATEQEKEERERRLFVSNVSHELRTPLTSVKSYLEALDDGALTESVAPSFIKVSLDETNRMMRMITDLLSLSR-----SHLDVELTNFTAFMNYILDRFDQIQSQQST--EIIRDYPDKSVWIEIDTDKMTQVIDNILNNAIKYSPDGGKVTITMQTTDTQLILSISDQGLGIPKKDLPLIFDRFYRVDKAR----GLGLAIAKEIVKQHKGFIWANSEEGEGSTFTIVLP |
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General information:
TITO was launched using:
| RESULT:
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Template: 4I5S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -76026 for 1657 contacts (-45.9/contact) +
2D Compatibility (PS) -25994 + (NN) -12293 + (LL) 7768
1D Compatibility (HY) -11200 + (ID) 2500
Total energy: -120245.0 ( -72.57 by residue)
QMean score : 0.438
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