Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQRIQLA-EDLQFSRVIHGLWRLNEWNYSDAELLSLIEWCIDHGITTFDHADIYGG--YTCEKLFGNALALS-PGLRENIELVTKCGIVLESPERPAHRSHHYNTSKSHILASVEQSLMNLRTDYIDMLLIHRPDPLMDPEGVAEAFQALKCSGKVRYFGVSNFKDHQYRMLES---YLPEKLVTNQIELSAYELENMLDGTLNLCQEKRIPPMAWSPLAGGKVFTENTDKD-----RRVRTALESVQGEIGAASLDEVMYAWLYTHPAGIMPIVGSGKRERISAAINALS-YKLDQDQWFRIFTAVQGYDIP
3N6Q Chain:A ((13-336))MQYRYCGKSGLRLPALSLGLWHNFGHVNALESQRAILRKAFDLGITHFDLANNYGPPPGSAEENFGRLLREDFAAYRDELIISTKAGYDMWPG------PYGSGGSRKYLLASLDQSLKRMGLEYVDIFYSHRVDENTPMEETASALAHAVQSGKALYVGISSYSPERTQKMVELLREWKIPLLIHQPSYNLLNRWVDKSGLLDTLQNNGVGCIAFTPLAQGLLTGKYL---LTEANLNSLRLLNEMAQQRG-QSMAQMALSWLLKDDRVTSVLIGASRAEQLEENVQALNNLTFSTKELAQIDQHIADGE--


General information:
TITO was launched using:
RESULT:

Template: 3N6Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1579 -172303 -109.12 -598.27
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : -109.12
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.455

(partial model without unconserved sides chains):
PDB file : Tito_3N6Q.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3N6Q-query.scw
PDB file : Tito_Scwrl_3N6Q.pdb: