Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSAGKSYRKKMKQRRMNMKISKYALGILMLSLVFVLSACGNNNSTKESTHDNHSDSSTHEEMDHSGSADVPEGLQESKNPKYKVGSQVIINTSHMKGMKGA--EATVTGAYDTTAYVVSYTPTNGGQRVDHHKWVIQEEIKDAG--DKTLQPGDQVILEASHMKG--MKGATAEIDSAEKTTVYMVDYTSTTSGEKVKNHKWVTEDELSAK
3H8Z Chain:A ((10-124))--------------------------------------------------------------------------------AYFQGLPVEVR-----GSNGAFYKGFVKDVHE-DSVTIFFEN--NW---QSERQIPFGDVRLPPPA--EITEGDEVEVYSRA---EPCGWWLARVRMMKG-DFYVIEYAAC--------NEIVTLERLR--


General information:
TITO was launched using:
RESULT:

Template: 3H8Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 389 -38049 -97.81 -388.26
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -97.81
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.490

(partial model without unconserved sides chains):
PDB file : Tito_3H8Z.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3H8Z-query.scw
PDB file : Tito_Scwrl_3H8Z.pdb: