Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence ---MKTFFQFDELGTSYRNEIIGGLTTFLSMAYILFVNPITLALESVKDFPEALRIDQGAVFTATALASAAGCILMGLIARYPIAIAPGMGLNAFFAFSVVLGMGISWQAALSGVFISGLIFVALSLTGFREKIINAIPPELKLAVGAGIGLFITFVGLQGSGIITANPST-LVTIGN-IHSGPV-LLTIFGVIVTVILMVLRVNAGVFIGMLLTAVAGMIFGLVPVPTQIIGSVPSLAPTFGQAWIHLPDIFSVQMLIVILTFLFVGFFDTAGTLVAVATQAGLMKENKLPRAGRALLADSSSIVIGAVLGTSTTTSYVESSSGVAAGARSGFAAIVTGILFLLATFFSPLLSVVTSNVTAP---ALIIVGALMVAPLGKIA-WDKFEVAVPAFLTMIMMPLTYSIATG----IAIGFIFYPITMVCKGKA---KEVHPIM-----YGLFVVFILYFIFLK 4UY5 Chain:A ((2-327)) TLSLANYLAADSAAEALRRDVRAGLT------------------AAPKSLP------------PKWFYDAVGSDLFDQITRLP----------------------------------------EYYPTRTEAQILRTRSAEIIAAAGAD-----TLVEL-GSG--TSEKTRMLLD--AMRDAELLRRFIPFDVDAGVLRSAGAAIGAEYPGIEIDAVCG---------------------DFEE---HLGKIPHVGRRLVVF----------LGSTIGNLTPAP--RAEFLSTLADTL-QPGDSLLLGTDLVKD--TGRLVRAYDDAAG--------------VTAAFNRNVLAVVNRELSADFDLDAFEHVAKWNSDEERIEMW--LRARTAQHVRVAALDLEVDFAAGEEMLTEVSCKFRPENVVAELAEAGLRQTHWWTDPAGDFGLSLAVRLEHHHH-

General information: TITO was launched using: RESULT: Template: 4UY5.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1442 -225091 -156.10 -740.43 target 2D structure prediction score : 0.41 Monomeric hydrophicity matching model chain A : 0.58 3D Compatibility (PKB) : -156.10 2D Compatibility (Sec. Struct. Predict.) : 0.41 1D Compatibility (Hydrophobicity) : 0.58 QMean score : 0.217

(partial model without unconserved sides chains): PDB file : Tito_4UY5.pdb: (Unconserved sides chains are recalculated) : Sequence: align-4UY5-query.scw PDB file : Tito_Scwrl_4UY5.pdb: