Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVLFFQIMVWCIVAGLGLYVYATWRFE---AKVKEKMSAIRKTWYLLFVLGAMVYWTYEPTSLFTHWERYLIVAVSFALIDAFIFLSAYVKKLAGSELETDTREILEENNEMLHMYLNRLKTYQYLLKNEPIHVYYGSIDAYAEGIDKLLKTYADKMNLTASLCHYSTQADKDRLTEHMDDPADVQTRLDRKDVYYDQYGKVVLIPFTIETQNYVIKLTSDSIVTEFDYLLFTSLTSIYDLVLPIEEEGEG
1BF4 Chain:A ((1-63))---------------------ATVKFKYKGEEKEVDISKIKKVWRV----GKMISFTYDEGGGKTGRGAVSEKDAPKELLQMLEKQKK-------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1BF4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 229 -30506 -133.21 -508.43
target 2D structure prediction score : 0.25
Monomeric hydrophicity matching model chain A : 0.50

3D Compatibility (PKB) : -133.21
2D Compatibility (Sec. Struct. Predict.) : 0.25
1D Compatibility (Hydrophobicity) : 0.50
QMean score : 0.282

(partial model without unconserved sides chains):
PDB file : Tito_1BF4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1BF4-query.scw
PDB file : Tito_Scwrl_1BF4.pdb: