Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKTCF-LSIWRVVDPI-YFFFSRLSLIDNDQKSVFRVRLTKYKGHHVVL-SDGTHIR-KNDV-LVKIHLHNIKLIRELQSIESAVRKGIIIYQKVYQSMPLLLDYINNHKK-SEKIKGIIGITMLDKG-VERLGFDVITPVNPFYRCFKKVSHVPILYLTSKPVSLRHLPNSSYLFISKEKLQKTY-QKKD
4NOH Chain:A ((3-169))ATGIVMYGDETGVQQTMDQYKDK-----IESQNKFEAKLGTVNEKKVLIMNKTTAEKMVKENMLKKVVKEDVEPIKALPAISD--EAGIVFAKEEQKDVVI------DGKKMKYEGNVVIGDARKYTDMY------AVVSDAEYAKISEPVKTIGLASFKENPK-----EKIFPDIKRGSKVEEAHMVEVK


General information:
TITO was launched using:
RESULT:

Template: 4NOH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 789 -49701 -62.99 -312.58
target 2D structure prediction score : 0.33
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : -62.99
2D Compatibility (Sec. Struct. Predict.) : 0.33
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.193

(partial model without unconserved sides chains):
PDB file : Tito_4NOH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4NOH-query.scw
PDB file : Tito_Scwrl_4NOH.pdb: