Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMHITTKRLLIREFEFKDWQAVYEYTSD-SNVMKYIPEGVFTEEDAKAFVNKNKG----DNAEKFPVILRDEDCLIGHIVFYKY-FGEHTYEIGWVFNPNYQNKGYASEAAQAILEYGFKEMNLHRIIATCQPENIPSYRVMKKIGMRREGFFKKCIPKGNEWWDEYYYAILEEEWN
2FCK Chain:A ((9-181))-QIVTQRLQLRLITADEAEELVQCIRQSQTLHQWVDW--FSQQEAEQFIQATRLNWVKAEAYGFGVFERQTQTLVGMVAINEFYHTFNMASLGYWIGDRYQRQGYGKEALTALILFCFERLELTRLEIVCDPENVPSQALALRCGANREQLAPNRFLYAGEPKAGIVFSLIP----


General information:
TITO was launched using:
RESULT:

Template: 2FCK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 749 -117585 -156.99 -721.38
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.74

3D Compatibility (PKB) : -156.99
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.523

(partial model without unconserved sides chains):
PDB file : Tito_2FCK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2FCK-query.scw
PDB file : Tito_Scwrl_2FCK.pdb: