Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAVIDDFEKLDIRTGTIVKAEEFPEARVPAIKLVIDFGTEIGIKQSSAQITKRYKPEGLINKQVIAVVNFPPRRIAGFKSEVLVLGGIPGQGDVVLLQPDQPVPNGTKIG
2CWP Chain:A ((6-112))LYDVDEFWKFQMKVGLVKKAEKIKRTKK-LIKLIVDFGNE--ERTIVTGIADQIPPEELEGKKFIFVVNLKPKKFSGVESQGMLILAETEDGKVYLIPVPEEVPVGARVW


General information:
TITO was launched using:
RESULT:

Template: 2CWP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 466 -53019 -113.77 -495.50
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.80

3D Compatibility (PKB) : -113.77
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.448

(partial model without unconserved sides chains):
PDB file : Tito_2CWP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2CWP-query.scw
PDB file : Tito_Scwrl_2CWP.pdb: