Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence------------------------------------------------------------MNNIGEIISNFEGIIGALLG--VIVTLILTHI-LKHFGQIKFYIVDFEIYFKTDNDGWGTNVMPSKDEAKQIEIHSQIEIYNGAEIPKVLREIKFCFYKNTNLIVSVTPDDKATTEEFAEFGYYRDKLFNINLPSKQIIAINIIKFLNEKETKQVKKCNRVYLEAKDHNGKMYKVFLGEF------------------------------------------------------------------------------------------------------------------------------------------------
5I0P Chain:A ((13-366))EHQLDYPFADTLPAAGDTFEVAPGVRWLRMPLPFSLDHINLWLLRDEIDGQAGWTIVDCGISS-EAIRTHWEQIFDRHLDGLPVLRVLVTHCHPDHFGLANWLCEGG------DQGRWNVRLWMTLGEYMFGCLMA----------------------------------AGAAADHFARHGLYYSDLVPAVPPRY----------------RRLREGDAVKI-----GARTWRVVTGYGHSPEHCALHSEADGVLISGDMVLPRISTNVSVFDLEPEANPLALYLESLGRYETMAPDTLVLPSHGKPFRGVRTRIAQLRAHHDARLEEVRVACAEKPMSAAGIVPIMFTFALGEALAHLNLLWLAGELVREHGDDGVIRYARA


General information:
TITO was launched using:
RESULT:

Template: 5I0P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 487 -3819 -7.84 -33.21
target 2D structure prediction score : 0.43
Monomeric hydrophicity matching model chain A : 0.55

3D Compatibility (PKB) : -7.84
2D Compatibility (Sec. Struct. Predict.) : 0.43
1D Compatibility (Hydrophobicity) : 0.55
QMean score : 0.250

(partial model without unconserved sides chains):
PDB file : Tito_5I0P.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5I0P-query.scw
PDB file : Tito_Scwrl_5I0P.pdb: