Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSMAYEEYMRQLVVPMRRELTGAGFEELTTAEEVENFME--KAEGTTLVVVNSVCG-CAAGLARPAATQAVLQNDKTPDNTVTVFAGQDKEATAKMREYFTGQEPSSPSMALLKGKEVVHFI--P--RHEIEGH--DMEEIMKNLTAAFDAHC
5GAN Chain:D ((4-122))----------------------VLLPQLRTGWHVDQAIVTETKRLVVIRFGRKNDRQCMIM--DELLSSIAE---RVRNF--AVIYLCDIDEVSDFDEMYEL--TDPMTVMFFYHNKHMMCDFGTGNNNKLNFIVDDKQEMIDILETIFR---


General information:
TITO was launched using:
RESULT:

Template: 5GAN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 450 -13118 -29.15 -119.25
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain D : 0.65

3D Compatibility (PKB) : -29.15
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.518

(partial model without unconserved sides chains):
PDB file : Tito_5GAN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5GAN-query.scw
PDB file : Tito_Scwrl_5GAN.pdb: