Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKSQLRKKTLEALSALSNEDILQKTERMYKYLFSLPEWQNAGTIAVTISRGLEIPTRPVIEQAWEEGKQVCIPKCHPDTKKMQFRTYQTDDQLETVYAGLLEPVIEKTKEVNPSQIDLMIVPGVCFDVNGFRVGFGGGYYDRYLSEYEGKTVSLLLECQLFAHVPRLPHDIPVHKLITEDRIISCFS
4MBE Chain:H ((15-22))-----------------------------------------------------------------------------------------------------------------------VLPTVGFD------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4MBE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain H - contact count / total energy / energy per contact / energy per residue : 1 -603 -602.50 -75.31
target 2D structure prediction score : 0.50
Monomeric hydrophicity matching model chain H : 0.53

3D Compatibility (PKB) : -602.50
2D Compatibility (Sec. Struct. Predict.) : 0.50
1D Compatibility (Hydrophobicity) : 0.53
QMean score : 0.462

(partial model without unconserved sides chains):
PDB file : Tito_4MBE.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4MBE-query.scw
PDB file : Tito_Scwrl_4MBE.pdb: