Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTKLKMLSMLTVMIASLFIFSSQALAVQYFTVSTSSGAPVNMRSGPGTNYPIMLSIPSGSRVPYYCYAYGTTVTGKYGTSNIWDQIQWKDSRGVVNIGYVSDTYVYTGSDGPVGYKCN
4KRT Chain:A ((229-286))------------------------------------STKLNIRAKGTTNSKIIGSIPAGETFKIKWVD---------EDYLGWYYVEYNGVVGYVNADYVEKL---------------


General information:
TITO was launched using:
RESULT:

Template: 4KRT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 211 -23708 -112.36 -408.75
target 2D structure prediction score : 0.40
Monomeric hydrophicity matching model chain A : 0.54

3D Compatibility (PKB) : -112.36
2D Compatibility (Sec. Struct. Predict.) : 0.40
1D Compatibility (Hydrophobicity) : 0.54
QMean score : 0.295

(partial model without unconserved sides chains):
PDB file : Tito_4KRT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4KRT-query.scw
PDB file : Tito_Scwrl_4KRT.pdb: